Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | Lupro_RS00745 | Not Available | Positive | 162875 - 163540 | 25357.5 |
| lipoyl synthase | Lupro_RS00750 | Not Available | Negative | 163722 - 164594 | 32892.3 |
| nramp family divalent metal transporter | Lupro_RS00755 | Not Available | Negative | 164630 - 165859 | 45453.9 |
| rna polymerase sigma factor | Lupro_RS00760 | Not Available | Negative | 165856 - 166419 | 22376.0 |
| glycosyltransferase | Lupro_RS00765 | Not Available | Negative | 166416 - 167513 | 42674.8 |
| membrane or secreted protein | Lupro_RS00770 | Not Available | Negative | 167517 - 167702 | 6460.04 |
| elongation factor g | Lupro_RS00775 | Not Available | Negative | 168059 - 170170 | 79256.2 |
| duf2141 domain-containing protein | Lupro_RS00780 | Not Available | Positive | 170420 - 170851 | 16144.2 |
| 2tm domain-containing protein | Lupro_RS00785 | Not Available | Positive | 170884 - 172227 | 52137.4 |
| 2tm domain-containing protein | Lupro_RS00790 | Not Available | Positive | 172296 - 172592 | 11905.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
