Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Lupro_RS07730 | Not Available | Negative | 1736691 - 1736945 | 9872.12 |
| sigma-70 family rna polymerase sigma factor | Lupro_RS07735 | Not Available | Negative | 1736955 - 1737524 | 22376.7 |
| pas domain s-box protein | Lupro_RS07740 | Not Available | Negative | 1737660 - 1741709 | 155542.0 |
| sensor histidine kinase | Lupro_RS07745 | Not Available | Negative | 1741817 - 1742608 | 29742.0 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | Lupro_RS07750 | Not Available | Positive | 1742775 - 1743593 | 29979.2 |
| 2-hydroxyacid dehydrogenase | Lupro_RS07755 | Not Available | Positive | 1743593 - 1744531 | 35151.7 |
| tm2 domain-containing protein | Lupro_RS07760 | Not Available | Positive | 1744633 - 1744920 | 10413.9 |
| gnat family n-acyltransferase | Lupro_RS07765 | Not Available | Negative | 1744925 - 1746760 | 70781.6 |
| aspartate kinase | Lupro_RS07770 | Not Available | Negative | 1746799 - 1748052 | 47427.2 |
| gnat family n-acetyltransferase | Lupro_RS07775 | Not Available | Negative | 1748052 - 1748537 | 18679.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
