Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine--trna ligase | Lupro_RS07685 | Not Available | Positive | 1726559 - 1727833 | 47737.2 |
| hypothetical protein | Lupro_RS13595 | Not Available | Negative | 1727826 - 1727969 | 5634.18 |
| tetratricopeptide repeat protein | Lupro_RS07690 | Not Available | Positive | 1728106 - 1729881 | 69342.9 |
| duf4286 family protein | Lupro_RS07695 | Not Available | Positive | 1729906 - 1730238 | 12984.7 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | Lupro_RS07700 | Not Available | Positive | 1730242 - 1731018 | 29752.3 |
| magnesium transporter | Lupro_RS07705 | Not Available | Positive | 1731008 - 1732360 | 50024.9 |
| rna methyltransferase | Lupro_RS07710 | Not Available | Negative | 1732357 - 1732887 | 19879.1 |
| dna mismatch repair protein muts | Lupro_RS07715 | Not Available | Positive | 1732950 - 1735562 | 98081.9 |
| sec-independent protein translocase subunit tata/tatb | Lupro_RS07720 | Not Available | Positive | 1735648 - 1735965 | 11867.6 |
| o-methyltransferase | Lupro_RS07725 | Not Available | Negative | 1735978 - 1736619 | 24145.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
