Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeee/yede family protein | Lupro_RS07335 | Not Available | Negative | 1649118 - 1649675 | 20000.6 |
| crp/fnr family transcriptional regulator | Lupro_RS07340 | Not Available | Negative | 1649740 - 1650372 | 24697.0 |
| 3-deoxy-d-manno-octulosonic acid transferase | Lupro_RS07345 | Not Available | Negative | 1650369 - 1651529 | 44859.4 |
| 50s ribosomal protein l27 | Lupro_RS07350 | Not Available | Negative | 1651691 - 1651951 | 9443.32 |
| 50s ribosomal protein l21 | Lupro_RS07355 | Not Available | Negative | 1651979 - 1652485 | 18466.6 |
| m16 family metallopeptidase | Lupro_RS07360 | Not Available | Positive | 1652813 - 1654132 | 50715.3 |
| m16 family metallopeptidase | Lupro_RS07365 | Not Available | Positive | 1654147 - 1656207 | 76606.2 |
| dmt family transporter | Lupro_RS07370 | Not Available | Negative | 1656258 - 1657130 | 32518.0 |
| heavy-metal-associated domain-containing protein | Lupro_RS07375 | Not Available | Positive | 1657220 - 1657597 | 13879.9 |
| hypothetical protein | Lupro_RS07380 | Not Available | Positive | 1657666 - 1657944 | 9803.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
