Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase formation protein hypd | Lupro_RS07135 | Not Available | Negative | 1598894 - 1599976 | 39484.0 |
| carbamoyltransferase hypf | Lupro_RS07140 | Not Available | Negative | 1599980 - 1602235 | 85731.6 |
| hydrogenase maturation protease | Lupro_RS07145 | Not Available | Negative | 1602321 - 1602857 | 19734.1 |
| ni/fe-hydrogenase, b-type cytochrome subunit | Lupro_RS07150 | Not Available | Negative | 1602863 - 1603633 | 30152.9 |
| nickel-dependent hydrogenase large subunit | Lupro_RS07155 | Not Available | Negative | 1603659 - 1605395 | 64272.0 |
| hydrogenase small subunit | Lupro_RS07160 | Not Available | Negative | 1605408 - 1606532 | 40897.9 |
| hydrogenase maturation nickel metallochaperone hypa | Lupro_RS07165 | Not Available | Positive | 1606773 - 1607114 | 12533.2 |
| hydrogenase nickel incorporation protein hypb | Lupro_RS07170 | Not Available | Positive | 1607126 - 1607947 | 30853.5 |
| hypc/hybg/hupf family hydrogenase formation chaperone | Lupro_RS07175 | Not Available | Positive | 1608122 - 1608400 | 10247.4 |
| gliding motility protein remb | Lupro_RS07180 | Not Available | Negative | 1608378 - 1610441 | 78883.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
