Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | Lupro_RS06830 | Not Available | Positive | 1541628 - 1542794 | 44072.8 |
| cytochrome ubiquinol oxidase subunit i | Lupro_RS06835 | Not Available | Positive | 1542833 - 1544164 | 50350.5 |
| cytochrome d ubiquinol oxidase subunit ii | Lupro_RS06840 | Not Available | Positive | 1544168 - 1545241 | 40136.8 |
| hypothetical protein | Lupro_RS06845 | Not Available | Positive | 1545255 - 1545554 | 10541.2 |
| tpm domain-containing protein | Lupro_RS06850 | Not Available | Negative | 1545770 - 1546591 | 28821.9 |
| tpm domain-containing protein | Lupro_RS06855 | Not Available | Negative | 1546591 - 1547028 | 16481.7 |
| lema family protein | Lupro_RS06860 | Not Available | Negative | 1547028 - 1547636 | 22434.7 |
| merr family transcriptional regulator | Lupro_RS06865 | Not Available | Negative | 1547714 - 1548049 | 13062.3 |
| m23 family metallopeptidase | Lupro_RS06870 | Not Available | Negative | 1548049 - 1549020 | 37135.7 |
| alanine--trna ligase | Lupro_RS06875 | Not Available | Positive | 1549246 - 1551858 | 98767.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
