Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoprenyl transferase | Lupro_RS06630 | Not Available | Positive | 1500840 - 1501595 | 29007.3 |
| outer membrane protein assembly factor bama | Lupro_RS06635 | Not Available | Positive | 1501588 - 1504143 | 96465.8 |
| omph family outer membrane protein | Lupro_RS06640 | Not Available | Positive | 1504208 - 1504987 | 30275.0 |
| omph family outer membrane protein | Lupro_RS06645 | Not Available | Positive | 1505007 - 1505510 | 18717.7 |
| glutamate racemase | Lupro_RS06650 | Not Available | Positive | 1505570 - 1506355 | 28682.8 |
| gamma carbonic anhydrase family protein | Lupro_RS06655 | Not Available | Negative | 1506490 - 1506999 | 18241.0 |
| type ix secretion system membrane protein porp/sprf | Lupro_RS06660 | Not Available | Negative | 1507017 - 1507994 | 36993.8 |
| hypothetical protein | Lupro_RS06665 | Not Available | Negative | 1508050 - 1508337 | 10904.4 |
| duf302 domain-containing protein | Lupro_RS06670 | Not Available | Positive | 1508574 - 1508963 | 14313.3 |
| hyc_cc_pp family protein | Lupro_RS06675 | Not Available | Positive | 1509026 - 1509442 | 15576.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
