Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | Lupro_RS06535 | Not Available | Negative | 1477528 - 1479282 | 64709.3 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | Lupro_RS06540 | Not Available | Positive | 1479385 - 1480509 | 43810.0 |
| gliding motility protein gldc | Lupro_RS06545 | Not Available | Negative | 1480525 - 1480863 | 13183.8 |
| gliding motility lipoprotein gldb | Lupro_RS06550 | Not Available | Negative | 1480863 - 1481813 | 37243.9 |
| nad+ synthase | Lupro_RS06555 | Not Available | Positive | 1481909 - 1483516 | 59142.2 |
| dna primase | Lupro_RS06560 | Not Available | Negative | 1483524 - 1485503 | 76070.6 |
| atp-dependent clp protease atp-binding subunit clpx | Lupro_RS06565 | Not Available | Negative | 1485707 - 1486948 | 45862.9 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | Lupro_RS06570 | Not Available | Negative | 1486986 - 1487645 | 24313.5 |
| m1 family metallopeptidase | Lupro_RS06575 | Not Available | Positive | 1487799 - 1489394 | 61894.3 |
| dead/deah box helicase | Lupro_RS06580 | Not Available | Positive | 1489518 - 1490849 | 50274.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
