Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is4 family transposase | Lupro_RS06290 | Not Available | Negative | 1419054 - 1420250 | 46651.6 |
| udp-glucose dehydrogenase family protein | Lupro_RS06295 | Not Available | Negative | 1420719 - 1422044 | 48834.5 |
| four helix bundle protein | Lupro_RS13145 | Not Available | Negative | 1422147 - 1422362 | 7963.36 |
| nucleotide sugar dehydrogenase | Lupro_RS06300 | Not Available | Negative | 1422548 - 1423831 | 47298.4 |
| dtdp-glucose 4,6-dehydratase | Lupro_RS06305 | Not Available | Negative | 1424146 - 1425156 | 38046.9 |
| dtdp-4-dehydrorhamnose reductase | Lupro_RS06310 | Not Available | Negative | 1425400 - 1426260 | 31929.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | Lupro_RS06315 | Not Available | Negative | 1426261 - 1426827 | 21886.1 |
| glucose-1-phosphate thymidylyltransferase rfba | Lupro_RS06320 | Not Available | Negative | 1426991 - 1427866 | 32375.3 |
| hypothetical protein | Lupro_RS06325 | Not Available | Positive | 1428586 - 1428765 | 7339.97 |
| hypothetical protein | Lupro_RS06330 | Not Available | Negative | 1429139 - 1429756 | 23094.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
