Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome small subunit-dependent gtpase a | Lupro_RS06140 | Not Available | Negative | 1377458 - 1378396 | 34961.2 |
| bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type ii | Lupro_RS06145 | Not Available | Negative | 1378760 - 1379836 | 40752.2 |
| prephenate dehydrogenase | Lupro_RS06150 | Not Available | Negative | 1379991 - 1380839 | 31420.1 |
| pyridoxal phosphate-dependent aminotransferase | Lupro_RS06155 | Not Available | Negative | 1380843 - 1382000 | 43102.5 |
| prephenate dehydratase | Lupro_RS06160 | Not Available | Negative | 1382000 - 1382818 | 30540.2 |
| capsule assembly wzi family protein | Lupro_RS06165 | Not Available | Positive | 1383282 - 1384664 | 51395.8 |
| tyrosine-protein phosphatase | Lupro_RS06170 | Not Available | Positive | 1384670 - 1385407 | 28224.3 |
| atp-binding protein | Lupro_RS06175 | Not Available | Negative | 1385740 - 1386930 | 46599.7 |
| gumc family protein | Lupro_RS06180 | Not Available | Negative | 1387333 - 1389696 | 89299.1 |
| polysaccharide biosynthesis/export family protein | Lupro_RS06185 | Not Available | Negative | 1389708 - 1390469 | 27678.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
