Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd | Lupro_RS05940 | Not Available | Negative | 1331984 - 1332643 | 25116.2 |
| branched-chain amino acid aminotransferase | Lupro_RS05945 | Not Available | Positive | 1332901 - 1333953 | 39730.1 |
| quinolinate synthase nada | Lupro_RS05950 | Not Available | Positive | 1334076 - 1335071 | 36841.2 |
| l-aspartate oxidase | Lupro_RS05955 | Not Available | Positive | 1335101 - 1336696 | 60117.9 |
| nucleoside triphosphate pyrophosphohydrolase family protein | Lupro_RS05960 | Not Available | Negative | 1336915 - 1337307 | 14834.9 |
| hypothetical protein | Lupro_RS05965 | Not Available | Negative | 1337331 - 1337912 | 22354.1 |
| sdr family nad(p)-dependent oxidoreductase | Lupro_RS05970 | Not Available | Negative | 1337953 - 1338672 | 27124.6 |
| cation diffusion facilitator family transporter | Lupro_RS05980 | Not Available | Negative | 1338953 - 1339819 | 31700.8 |
| dipeptidyl-peptidase 3 family protein | Lupro_RS05985 | Not Available | Negative | 1339829 - 1341862 | 76870.1 |
| srpbcc family protein | Lupro_RS05990 | Not Available | Positive | 1341956 - 1342966 | 38467.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
