Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Lupro_RS05800 | Not Available | Positive | 1291438 - 1291872 | 15484.1 |
| histidine kinase | Lupro_RS05805 | Not Available | Positive | 1292065 - 1295010 | 113955.0 |
| lytr/algr family response regulator transcription factor | Lupro_RS05810 | Not Available | Positive | 1295003 - 1295749 | 28253.2 |
| hypothetical protein | Lupro_RS05815 | Not Available | Positive | 1296313 - 1298010 | 64532.1 |
| hypothetical protein | Lupro_RS05820 | Not Available | Positive | 1298022 - 1304054 | 219151.0 |
| hypothetical protein | Lupro_RS05825 | Not Available | Positive | 1304066 - 1306138 | 78881.3 |
| asparagine synthase b | Lupro_RS05830 | Not Available | Positive | 1307959 - 1308177 | 7662.21 |
| hu family dna-binding protein | Lupro_RS13835 | Not Available | Positive | 1308238 - 1309953 | 64969.3 |
| agmatine deiminase family protein | Lupro_RS05835 | Not Available | Positive | 1309968 - 1311383 | 54507.0 |
| hypothetical protein | Lupro_RS05840 | Not Available | Positive | 1311486 - 1312064 | 21164.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
