Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Lupro_RS05645 | Not Available | Negative | 1260072 - 1261355 | 47062.7 |
| type iii pantothenate kinase | Lupro_RS05650 | Not Available | Negative | 1261359 - 1262081 | 26716.0 |
| Trna-phe | Not Available | Not Available | Positive | 1262178 - 1262250 | Not Available |
| hypothetical protein | Lupro_RS05660 | Not Available | Negative | 1262307 - 1262594 | 11009.1 |
| pseudouridine synthase | Lupro_RS05665 | Not Available | Negative | 1262748 - 1263653 | 34617.8 |
| geranylgeranylglycerol-phosphate geranylgeranyltransferase | Lupro_RS05670 | Not Available | Negative | 1263710 - 1264645 | 36143.6 |
| mevalonate kinase | Lupro_RS05675 | Not Available | Negative | 1264701 - 1265627 | 34700.9 |
| four helix bundle protein | Lupro_RS05680 | Not Available | Negative | 1265637 - 1265999 | 13941.0 |
| diphosphomevalonate/mevalonate 3,5-bisphosphate decarboxylase family protein | Lupro_RS05685 | Not Available | Negative | 1266027 - 1267196 | 44561.2 |
| thiamine diphosphokinase | Lupro_RS05695 | Not Available | Positive | 1268046 - 1268654 | 22628.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
