Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase | Lupro_RS05500 | Not Available | Positive | 1228044 - 1230104 | 76019.5 |
| peroxiredoxin | Lupro_RS05505 | Not Available | Positive | 1230124 - 1230699 | 21129.3 |
| mfs transporter | Lupro_RS13795 | Not Available | Negative | 1230696 - 1231406 | 27213.1 |
| mfs transporter | Lupro_RS13800 | Not Available | Negative | 1231292 - 1231930 | 23882.4 |
| duf1684 domain-containing protein | Lupro_RS05515 | Not Available | Positive | 1232183 - 1232809 | 24082.8 |
| outer membrane beta-barrel protein | Lupro_RS05520 | Not Available | Negative | 1232970 - 1233974 | 36544.8 |
| ammonium transporter | Lupro_RS05525 | Not Available | Negative | 1234310 - 1235551 | 44275.9 |
| p-ii family nitrogen regulator | Lupro_RS05530 | Not Available | Negative | 1235590 - 1235928 | 12651.1 |
| fluoride efflux transporter crcb | Lupro_RS05535 | Not Available | Negative | 1236234 - 1236605 | 13537.6 |
| doxx family protein | Lupro_RS05540 | Not Available | Negative | 1236613 - 1237575 | 36839.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
