Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | Lupro_RS05300 | Not Available | Negative | 1178156 - 1179358 | 45567.8 |
| Tmrna,resume consensus sequence (at 88): tttaaacggcgaagataa | Not Available | Not Available | Positive | 1179484 - 1179875 | Not Available |
| mgtc/sapb family protein | Lupro_RS05310 | Not Available | Positive | 1179965 - 1181233 | 47434.9 |
| glucosamine-6-phosphate deaminase | Lupro_RS05315 | Not Available | Negative | 1181249 - 1183186 | 73376.1 |
| deor/glpr family dna-binding transcription regulator | Lupro_RS05320 | Not Available | Positive | 1183428 - 1184177 | 27794.1 |
| tonb-dependent receptor domain-containing protein | Lupro_RS05325 | Not Available | Positive | 1184311 - 1187253 | 107757.0 |
| ragb/susd family nutrient uptake outer membrane protein | Lupro_RS05330 | Not Available | Positive | 1187264 - 1188589 | 48272.8 |
| sodium:solute symporter | Lupro_RS05335 | Not Available | Positive | 1188776 - 1190233 | 54734.9 |
| n-acetylmuramic acid 6-phosphate etherase | Lupro_RS05340 | Not Available | Positive | 1190223 - 1191044 | 29951.4 |
| anhydro-n-acetylmuramic acid kinase | Lupro_RS05345 | Not Available | Positive | 1191046 - 1192110 | 39371.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
