Spongiibacter sp. IMCC21906

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Cellvibrionales

Family

Spongiibacteraceae

Genus

Spongiibacter

Description

Spongiibacter sp. IMCC21906 is a notable bacterium characterized by its possession of two replicons, which are genetic structures that can replicate independently within the cell. This trait may contribute to its adaptability and versatility in various environments. The organism is cataloged under the accessions NZ_CP011478.1 and NZ_CP011477.1, which are essential for researchers seeking to identify and study this specific strain in genomic databases. The dual-replicon structure of Spongiibacter sp. IMCC21906 can potentially provide insights into its metabolic capabilities and ecological interactions. Bacteria with multiple replicons often exhibit enhanced genetic diversity and can adapt more readily to changing environmental conditions. This adaptability might play a significant role in its ecological niche, possibly influencing its interactions with other microorganisms and its efficiency in nutrient cycling within its habitat. In summary, Spongiibacter sp. IMCC21906, with its two replicons and specific genomic accessions, represents a unique subject for microbiological study. Understanding its replicon structure may reveal important aspects of its biology and ecological contributions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCellvibrionales
FamilySpongiibacteraceae
GenusSpongiibacter
SpeciesSpongiibacter sp. IMCC21906
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spongiibacter sp. IMCC21906 plasmid unnamed, complete sequence.

Gene Summary

Adenine Count

3328 bp

Thymine Count

3032 bp

Guanine Count

2814 bp

Cytosine Count

3511 bp

Genome Length

12685 bp

Protein-coding Genes

15 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trkh family potassium uptake proteinIMCC21906_RS02140Not AvailableNegative479075 - 48052652596.4
trk system potassium transporter trkaIMCC21906_RS02145Not AvailableNegative480562 - 48193549946.2
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbIMCC21906_RS02150Not AvailableNegative481998 - 48330247464.9
methionyl-trna formyltransferaseIMCC21906_RS02155Not AvailableNegative483299 - 48426134101.8
peptide deformylaseIMCC21906_RS02160Not AvailableNegative484277 - 48478319375.2
lysm peptidoglycan-binding domain-containing proteinIMCC21906_RS02165Not AvailablePositive484983 - 48601137510.2
dna-processing protein dpraIMCC21906_RS02170Not AvailablePositive486084 - 48717238703.8
l-threonylcarbamoyladenylate synthaseIMCC21906_RS02175Not AvailablePositive487299 - 48786820837.0
oxygen-dependent coproporphyrinogen oxidaseIMCC21906_RS02180Not AvailablePositive487912 - 48880834509.6
shikimate dehydrogenaseIMCC21906_RS02185Not AvailablePositive488850 - 48967730031.7

Displaying genes 441 – 450 of 3220 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.