Bacteroidetes bacterium OLB10

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Order

Family

Genus

Description

Bacteroidetes bacterium OLB10 is characterized by a single replicon, which indicates a streamlined genome structure. The genomic information for this bacterium is cataloged under the accession number LNBX00000000.1, providing a reference point for researchers interested in studying its genetic makeup and potential applications. Bacteroidetes are a phylum of bacteria that play significant roles in various ecological niches, particularly in the human gut and other environments rich in organic material. Members of this phylum are known for their ability to degrade complex carbohydrates, contributing to nutrient cycling and energy flow in ecosystems. This trait suggests that OLB10 may also possess capabilities related to carbohydrate metabolism, although specific metabolic pathways or functions have not been provided. Overall, the presence of OLB10 within the Bacteroidetes phylum implies that it could be involved in important ecological processes, particularly in environments where organic matter is abundant. Understanding its genetic characteristics and metabolic potential could offer insights into its role in microbial communities and its contributions to biogeochemical cycles.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Bacteroidetes bacterium OLB10 UZ10_BCD003CONTIG000051, whole

Gene Summary

Adenine Count

906445 bp

Thymine Count

902636 bp

Guanine Count

575359 bp

Cytosine Count

578466 bp

Genome Length

2962906 bp

Protein-coding Genes

2556 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l28UZ10_BCD003001638B3ERW9Negative1861082 - 18613158563.54
putative amino acid transporterUZ10_BCD003001639Not AvailableNegative1861461 - 186268445297.6
gmp synthaseUZ10_BCD003001640Q11WK3Negative1862681 - 186420756545.2
threonyl-trna synthetaseUZ10_BCD003001641Q11UK3Positive1864520 - 186645774324.4
translation initiation factor 3 (bif-3)UZ10_BCD003001642A6L9S3Positive1866599 - 186706317932.0
50s ribosomal protein l35UZ10_BCD003001643A5FP03Positive1867097 - 18672947369.3
50s ribosomal protein l20UZ10_BCD003001644A6L7J5Positive1867430 - 186772611250.7
cytochrome c biogenesis proteinUZ10_BCD003001645Not AvailableNegative1867926 - 186831514475.4
cytochrome c assembly proteinUZ10_BCD003001646Not AvailableNegative1868329 - 186915331366.4
abc transporter involved in cytochrome c biogenesis permeaseUZ10_BCD003001647Not AvailableNegative1869210 - 186968617461.3

Displaying genes 1641 – 1650 of 2597 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

136 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000433malonateC3H2O4Chemical structure of malonateNot available
Average102.0456Da
Monoisotopic101.9953086Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da

Displaying 1–10 of 136 metabolites

Health Effects

No health effects information available for this bacterium.