Nitrospira sp. OLB3

Kingdom

Pseudomonadati

Phylum

Nitrospirota

Class

Nitrospiria

Order

Nitrospirales

Family

Nitrospiraceae

Genus

Nitrospira

Description

Nitrospira sp. OLB3 is characterized by a single replicon, indicating a streamlined genomic structure. This organism is classified under the genus Nitrospira, which is known for its role in the nitrogen cycle, particularly in nitrification processes. The specific accession number for Nitrospira sp. OLB3 is JZQY00000000.1, which provides a reference for genetic and genomic studies related to this species. The single replicon feature suggests that Nitrospira sp. OLB3 may have a relatively simple genomic architecture, which can be advantageous for rapid adaptation to environmental changes. This trait is often associated with microbial species that thrive in specific ecological niches, potentially allowing Nitrospira sp. OLB3 to be an efficient player in its habitat. Nitrospira species are generally recognized for their ability to oxidize nitrite to nitrate, contributing significantly to soil and aquatic nitrogen cycling. The presence of Nitrospira sp. OLB3 in an ecosystem may enhance nitrogen availability for plants and other organisms, thereby influencing nutrient dynamics and ecosystem productivity. Understanding the genomic traits of Nitrospira sp. OLB3 could provide insights into its ecological roles and interactions within microbial communities, particularly in relation to nitrogen cycling processes.

Taxonomy

KingdomPseudomonadati
PhylumNitrospirota
ClassNitrospiria
OrderNitrospirales
FamilyNitrospiraceae
GenusNitrospira
SpeciesNitrospira sp. OLB3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Nitrospira sp. OLB3 UZ03_NOB00100CONTIG000080, whole genome

Gene Summary

Adenine Count

738926 bp

Thymine Count

749305 bp

Guanine Count

1155118 bp

Cytosine Count

1110914 bp

Genome Length

3754263 bp

Protein-coding Genes

3743 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative histidine kinaseUZ03_NOB001000011Not AvailableNegative10049 - 1185466019.9
peptidase propeptide and ypeb domain proteinUZ03_NOB001000012Not AvailableNegative12127 - 1285827383.5
nickel uptake substrate-specific transmembrane regionUZ03_NOB001000013Not AvailableNegative12860 - 1366929311.4
putative tonb-dependent iron(iii) dicitrate transport protein fecaUZ03_NOB001000014Not AvailableNegative13721 - 1511851298.2
hypothetical proteinUZ03_NOB001000015Not AvailablePositive15373 - 1633536397.7
putative iron dicitrate transmembrane sensor fecrUZ03_NOB001000016Not AvailableNegative16325 - 1701724989.1
putative rna polymerase sigma factor feci (sigma-19)UZ03_NOB001000017Not AvailableNegative17407 - 176468814.78
multidrug efflux system subunit cUZ03_NOB001000018Not AvailableNegative18002 - 1874726476.2
chat domain proteinUZ03_NOB001000019Not AvailablePositive18748 - 2013751133.6
atp-dependent protease la 1UZ03_NOB001000020Not AvailableNegative20160 - 2084324385.6

Displaying genes 11 – 20 of 3743 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.