Nitrospira sp. OLB3

Kingdom

Pseudomonadati

Phylum

Nitrospirota

Class

Nitrospiria

Order

Nitrospirales

Family

Nitrospiraceae

Genus

Nitrospira

Description

Nitrospira sp. OLB3 is characterized by a single replicon, indicating a streamlined genomic structure. This organism is classified under the genus Nitrospira, which is known for its role in the nitrogen cycle, particularly in nitrification processes. The specific accession number for Nitrospira sp. OLB3 is JZQY00000000.1, which provides a reference for genetic and genomic studies related to this species. The single replicon feature suggests that Nitrospira sp. OLB3 may have a relatively simple genomic architecture, which can be advantageous for rapid adaptation to environmental changes. This trait is often associated with microbial species that thrive in specific ecological niches, potentially allowing Nitrospira sp. OLB3 to be an efficient player in its habitat. Nitrospira species are generally recognized for their ability to oxidize nitrite to nitrate, contributing significantly to soil and aquatic nitrogen cycling. The presence of Nitrospira sp. OLB3 in an ecosystem may enhance nitrogen availability for plants and other organisms, thereby influencing nutrient dynamics and ecosystem productivity. Understanding the genomic traits of Nitrospira sp. OLB3 could provide insights into its ecological roles and interactions within microbial communities, particularly in relation to nitrogen cycling processes.

Taxonomy

KingdomPseudomonadati
PhylumNitrospirota
ClassNitrospiria
OrderNitrospirales
FamilyNitrospiraceae
GenusNitrospira
SpeciesNitrospira sp. OLB3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Nitrospira sp. OLB3 UZ03_NOB00100CONTIG000080, whole genome

Gene Summary

Adenine Count

738926 bp

Thymine Count

749305 bp

Guanine Count

1155118 bp

Cytosine Count

1110914 bp

Genome Length

3754263 bp

Protein-coding Genes

3743 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uroporphyrinogen decarboxylaseUZ03_NOB001001379Not AvailablePositive1383169 - 138419438094.4
ferrochelataseUZ03_NOB001001380Not AvailablePositive1384219 - 138516334626.8
protoporphyrinogen oxidaseUZ03_NOB001001381Not AvailablePositive1385232 - 138662650546.4
hypothetical proteinUZ03_NOB001001382Not AvailablePositive1386667 - 138708315275.5
hypothetical proteinUZ03_NOB001001383Not AvailableNegative1387324 - 138793522166.5
nucleoside triphosphate pyrophosphohydrolaseUZ03_NOB001001384Not AvailableNegative1387932 - 138881633281.9
hypothetical proteinUZ03_NOB001001385Not AvailablePositive1388954 - 138936414821.7
sensor histidine kinaseUZ03_NOB001001386Not AvailablePositive1389523 - 139180284757.8
sigma-54 dependent dna-binding response regulatorUZ03_NOB001001387Not AvailablePositive1391821 - 139321852086.3
phosphoribosylformylglycinamidine cyclo-ligaseUZ03_NOB001001388Not AvailablePositive1393278 - 139431536557.2

Displaying genes 1361 – 1370 of 3743 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.