Nitrospira sp. OLB3

Kingdom

Pseudomonadati

Phylum

Nitrospirota

Class

Nitrospiria

Order

Nitrospirales

Family

Nitrospiraceae

Genus

Nitrospira

Description

Nitrospira sp. OLB3 is characterized by a single replicon, indicating a streamlined genomic structure. This organism is classified under the genus Nitrospira, which is known for its role in the nitrogen cycle, particularly in nitrification processes. The specific accession number for Nitrospira sp. OLB3 is JZQY00000000.1, which provides a reference for genetic and genomic studies related to this species. The single replicon feature suggests that Nitrospira sp. OLB3 may have a relatively simple genomic architecture, which can be advantageous for rapid adaptation to environmental changes. This trait is often associated with microbial species that thrive in specific ecological niches, potentially allowing Nitrospira sp. OLB3 to be an efficient player in its habitat. Nitrospira species are generally recognized for their ability to oxidize nitrite to nitrate, contributing significantly to soil and aquatic nitrogen cycling. The presence of Nitrospira sp. OLB3 in an ecosystem may enhance nitrogen availability for plants and other organisms, thereby influencing nutrient dynamics and ecosystem productivity. Understanding the genomic traits of Nitrospira sp. OLB3 could provide insights into its ecological roles and interactions within microbial communities, particularly in relation to nitrogen cycling processes.

Taxonomy

KingdomPseudomonadati
PhylumNitrospirota
ClassNitrospiria
OrderNitrospirales
FamilyNitrospiraceae
GenusNitrospira
SpeciesNitrospira sp. OLB3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Nitrospira sp. OLB3 UZ03_NOB00100CONTIG000080, whole genome

Gene Summary

Adenine Count

738926 bp

Thymine Count

749305 bp

Guanine Count

1155118 bp

Cytosine Count

1110914 bp

Genome Length

3754263 bp

Protein-coding Genes

3743 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
twin arginine-targeting protein translocase, tata/e familyUZ03_NOB001001075Not AvailablePositive1083984 - 108482028799.4
putative lyaseUZ03_NOB001001076Not AvailablePositive1084863 - 108564226432.4
pilz domain proteinUZ03_NOB001001077Not AvailableNegative1085608 - 108612618934.6
pilz domain proteinUZ03_NOB001001078Not AvailableNegative1086148 - 108667219124.1
atp-dependent clp protease atp-binding subunit clpxUZ03_NOB001001079Not AvailableNegative1086876 - 108813246686.4
atp-dependent clp protease proteolytic subunit clppUZ03_NOB001001080Not AvailableNegative1088158 - 108879323189.2
trigger factor (tf)UZ03_NOB001001081Not AvailableNegative1088903 - 109019848550.3
pbs lyase heat-like repeat proteinUZ03_NOB001001083Not AvailablePositive1090632 - 109171739471.5
putative abc transporter leu/ile/val-binding proteinUZ03_NOB001001084Not AvailablePositive1091891 - 109313544533.5
putative ompa/motb family outer membrane proteinUZ03_NOB001001085Not AvailableNegative1093187 - 109463252344.3

Displaying genes 1061 – 1070 of 3743 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.