Thalassospira sp. HJ

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Thalassospiraceae

Genus

Thalassospira

Description

Thalassospira sp. HJ is a Gram-negative, rod-shaped bacterium characterized by a single replicon. The organism presents a unique profile that contributes to our understanding of microbial diversity in marine environments. The Gram-negative classification indicates that Thalassospira sp. HJ possesses a thin peptidoglycan layer and an outer membrane, which is typical for this group of bacteria. This structural feature often influences the organism's interactions with its environment, including its susceptibility to antibiotics and its role in nutrient cycling. The presence of a single replicon suggests a streamlined genomic structure, which may be advantageous for adaptation to specific ecological niches. This trait can be reflective of the organism's evolutionary strategies, allowing it to efficiently manage its genetic material in marine ecosystems. The accession number for Thalassospira sp. HJ is JYII00000000.1, which is vital for researchers seeking to access genomic data for further studies. This genomic information can provide insights into the metabolic pathways and ecological roles of Thalassospira sp. HJ. In conclusion, Thalassospira sp. HJ exemplifies a specialized adaptation to marine environments as a Gram-negative, rod-shaped bacterium with a single replicon. Understanding its traits and genomic information can enhance our knowledge of microbial dynamics in oceanic ecosystems and contribute to broader ecological and biological studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyThalassospiraceae
GenusThalassospira
SpeciesThalassospira sp. HJ
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thalassospira sp. HJ NODE_17, whole genome shotgun sequence.

Gene Summary

Adenine Count

954932 bp

Thymine Count

970215 bp

Guanine Count

1183406 bp

Cytosine Count

1160846 bp

Genome Length

4269399 bp

Protein-coding Genes

3670 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oxidoreductaseUF64_02620P55480Negative570955 - 57215743211.7
carboxynorspermidine decarboxylaseUF64_02630Q5QCP2Positive573070 - 57416740899.5
saccharopine dehydrogenaseUF64_02635P0DPE4Positive574248 - 57548944953.6
bicyclomycin resistance proteinUF64_02645Not AvailablePositive576978 - 57832448619.1
transporterUF64_02650Not AvailablePositive578457 - 57971046194.1
abc transporter permeaseUF64_02655P77716Positive579710 - 58093943861.3
abc transporter atp-binding proteinUF64_02665Not AvailablePositive582296 - 58336938435.2
arsr family transcriptional regulatorUF64_02670Not AvailableNegative583536 - 58397316791.6
hypothetical proteinUF64_02675Not AvailablePositive584129 - 58441610812.1
lysr family transcriptional regulatorUF64_02680P20668Positive584496 - 58540432943.6

Displaying genes 501 – 510 of 3734 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

268 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 268 metabolites

Health Effects

No health effects information available for this bacterium.