Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium characterized as a heterotroph and requiring aerobic conditions for growth. This species is non-motile and exhibits mesophilic growth characteristics, with an optimal temperature of 29°C. The bacterium has a single replicon, which is indicative of its genetic organization. Its accession number is FZOQ00000000.1, providing a reference for genomic studies and further research into its biological functions. The ecological significance of Pontibacter ummariensis may lie in its role within microbial communities, particularly in environments where organic matter decomposition occurs. As a heterotrophic organism, it likely contributes to nutrient cycling by breaking down organic compounds, thus facilitating the availability of nutrients for other organisms in its ecosystem. Understanding the traits and ecological roles of such microorganisms can provide insights into their contributions to environmental health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis strain NKM1 genome assembly, contig:

Gene Summary

Adenine Count

1476968 bp

Thymine Count

1491156 bp

Guanine Count

1505158 bp

Cytosine Count

1500213 bp

Genome Length

5973733 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-glucosidaseSAMN06296052_102263Not AvailablePositive750511 - 75210961942.3
maltooligosyl trehalose hydrolaseSAMN06296052_102264Not AvailablePositive752169 - 75401970602.1
maltose alpha-d-glucosyltransferase/ alpha-amylaseSAMN06296052_102265Not AvailableNegative754024 - 75569464275.9
atp-binding cassette, subfamily f, member 3SAMN06296052_102266Not AvailableNegative755898 - 75782673226.4
2'-5' rna ligase superfamily proteinSAMN06296052_102267Not AvailablePositive758092 - 75867622048.6
homospermidine synthase (spermidine-specific)SAMN06296052_102268Not AvailableNegative758733 - 75970436336.4
atp dependent peptidase codwx, codw component. threonine peptidase. merops family t01bSAMN06296052_102269Not AvailableNegative759945 - 76048719723.9
pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase)SAMN06296052_102270Not AvailableNegative761259 - 76294759885.4
probable phosphoglycerate mutaseSAMN06296052_102271Not AvailableNegative763036 - 76369525361.5
uncharacterized domain 1-containing proteinSAMN06296052_102272Not AvailablePositive763812 - 76417412892.7

Displaying genes 731 – 740 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.