Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium characterized as a heterotroph and requiring aerobic conditions for growth. This species is non-motile and exhibits mesophilic growth characteristics, with an optimal temperature of 29°C. The bacterium has a single replicon, which is indicative of its genetic organization. Its accession number is FZOQ00000000.1, providing a reference for genomic studies and further research into its biological functions. The ecological significance of Pontibacter ummariensis may lie in its role within microbial communities, particularly in environments where organic matter decomposition occurs. As a heterotrophic organism, it likely contributes to nutrient cycling by breaking down organic compounds, thus facilitating the availability of nutrients for other organisms in its ecosystem. Understanding the traits and ecological roles of such microorganisms can provide insights into their contributions to environmental health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis strain NKM1 genome assembly, contig:

Gene Summary

Adenine Count

1476968 bp

Thymine Count

1491156 bp

Guanine Count

1505158 bp

Cytosine Count

1500213 bp

Genome Length

5973733 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidinol phosphate aminotransferase apoenzymeSAMN06296052_102223Not AvailableNegative703300 - 70434338667.7
histidinol dehydrogenaseSAMN06296052_102224Not AvailableNegative704336 - 70562545899.1
atp phosphoribosyltransferaseSAMN06296052_102225Not AvailableNegative705629 - 70648030997.6
por secretion system c-terminal sorting domain-containing proteinSAMN06296052_102226Not AvailableNegative706841 - 70958296279.8
hypothetical proteinSAMN06296052_102227Not AvailablePositive709860 - 7100336763.42
protein of unknown functionSAMN06296052_102228Not AvailablePositive710098 - 71095832767.0
outer membrane receptor proteins, mostly fe transportSAMN06296052_102229Not AvailableNegative711583 - 71401891301.0
ribulose-phosphate 3-epimeraseSAMN06296052_102230Not AvailableNegative714030 - 71468623839.8
por secretion system c-terminal sorting domain-containing proteinSAMN06296052_102231Not AvailableNegative714742 - 71639158941.8
hypothetical proteinSAMN06296052_102232Not AvailableNegative716394 - 71710727298.1

Displaying genes 691 – 700 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.