Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_1015 | Not Available | Negative | 4343 - 4561 | 7844.95 |
| hypothetical protein | SAMN06296052_1016 | Not Available | Negative | 4672 - 5859 | 44343.5 |
| protein of unknown function | SAMN06296052_1017 | Not Available | Positive | 6021 - 6716 | 24871.4 |
| adenosylhomocysteinase | SAMN06296052_1018 | Not Available | Positive | 6876 - 8183 | 47879.6 |
| two component transcriptional regulator, lyttr family | SAMN06296052_1019 | Not Available | Negative | 8387 - 9127 | 27974.3 |
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN06296052_10110 | Not Available | Negative | 9157 - 12135 | 111665.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06296052_10111 | Not Available | Negative | 12252 - 13346 | 41186.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06296052_10112 | Not Available | Negative | 13349 - 14110 | 29569.7 |
| rna polymerase, sigma subunit, ecf family | SAMN06296052_10113 | Not Available | Positive | 14381 - 14974 | 22713.7 |
| putative zinc-finger | SAMN06296052_10114 | Not Available | Positive | 14997 - 15278 | 10634.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
