Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0126 domain-containing protein | SAMN06296052_1558 | Not Available | Negative | 5897743 - 5897969 | 8147.15 |
| ipt/tig domain-containing protein | SAMN06296052_1561 | Not Available | Positive | 5898880 - 5905375 | 223096.0 |
| hypothetical protein | SAMN06296052_1571 | Not Available | Negative | 5905376 - 5905467 | 3322.88 |
| hypothetical protein | SAMN06296052_1572 | Not Available | Negative | 5905706 - 5906227 | 20577.1 |
| initiator replication protein | SAMN06296052_1573 | Not Available | Positive | 5907044 - 5907970 | 35633.3 |
| hypothetical protein | SAMN06296052_1574 | Not Available | Positive | 5908024 - 5908248 | 9048.64 |
| hypothetical protein | SAMN06296052_1575 | Not Available | Negative | 5908259 - 5908564 | 11485.4 |
| hypothetical protein | SAMN06296052_1576 | Not Available | Positive | 5909298 - 5909720 | 15692.5 |
| dna-binding transcriptional regulator, marr family | SAMN06296052_1577 | Not Available | Negative | 5909778 - 5910278 | 18991.6 |
| plasmid recombination enzyme | SAMN06296052_1578 | Not Available | Negative | 5910575 - 5911563 | 37231.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
