Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium characterized as a heterotroph and requiring aerobic conditions for growth. This species is non-motile and exhibits mesophilic growth characteristics, with an optimal temperature of 29°C. The bacterium has a single replicon, which is indicative of its genetic organization. Its accession number is FZOQ00000000.1, providing a reference for genomic studies and further research into its biological functions. The ecological significance of Pontibacter ummariensis may lie in its role within microbial communities, particularly in environments where organic matter decomposition occurs. As a heterotrophic organism, it likely contributes to nutrient cycling by breaking down organic compounds, thus facilitating the availability of nutrients for other organisms in its ecosystem. Understanding the traits and ecological roles of such microorganisms can provide insights into their contributions to environmental health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis strain NKM1 genome assembly, contig:

Gene Summary

Adenine Count

1476968 bp

Thymine Count

1491156 bp

Guanine Count

1505158 bp

Cytosine Count

1500213 bp

Genome Length

5973733 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
starch-binding associating with outer membraneSAMN06296052_1542Not AvailableNegative5883536 - 588535968828.9
tonb-linked outer membrane protein, susc/raga familySAMN06296052_1543Not AvailableNegative5885404 - 5888583117173.0
hypothetical proteinSAMN06296052_1544Not AvailableNegative5889636 - 58898909413.59
hypothetical proteinSAMN06296052_1551Not AvailableNegative5890160 - 58903788180.2
hypothetical proteinSAMN06296052_1552Not AvailablePositive5891434 - 589236634721.4
ser/thr protein kinase rdoa involved in cpx stress response, mazf antagonistSAMN06296052_1553Not AvailablePositive5892363 - 589351143789.1
carbohydrate-binding family 9SAMN06296052_1554Not AvailablePositive5893514 - 589419425654.7
oxidoreductase family, nad-binding rossmann foldSAMN06296052_1555Not AvailablePositive5894272 - 589571154163.0
helicase associated domain-containing proteinSAMN06296052_1556Not AvailablePositive5895841 - 589752367910.4
hypothetical proteinSAMN06296052_1557Not AvailableNegative5897411 - 58976298120.46

Displaying genes 5121 – 5130 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.