Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium characterized as a heterotroph and requiring aerobic conditions for growth. This species is non-motile and exhibits mesophilic growth characteristics, with an optimal temperature of 29°C. The bacterium has a single replicon, which is indicative of its genetic organization. Its accession number is FZOQ00000000.1, providing a reference for genomic studies and further research into its biological functions. The ecological significance of Pontibacter ummariensis may lie in its role within microbial communities, particularly in environments where organic matter decomposition occurs. As a heterotrophic organism, it likely contributes to nutrient cycling by breaking down organic compounds, thus facilitating the availability of nutrients for other organisms in its ecosystem. Understanding the traits and ecological roles of such microorganisms can provide insights into their contributions to environmental health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis strain NKM1 genome assembly, contig:

Gene Summary

Adenine Count

1476968 bp

Thymine Count

1491156 bp

Guanine Count

1505158 bp

Cytosine Count

1500213 bp

Genome Length

5973733 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-amino acid n-acyltransferase yncaSAMN06296052_13622Not AvailablePositive5524164 - 552467919240.8
reactive intermediate/imine deaminaseSAMN06296052_13623Not AvailablePositive5524733 - 552511314373.2
threonine dehydrataseSAMN06296052_13624Not AvailablePositive5525110 - 552604233437.7
hypothetical proteinSAMN06296052_13625Not AvailableNegative5526206 - 55264278321.29
transposase is116/is110/is902 family proteinSAMN06296052_13626Not AvailableNegative5526391 - 552718829845.1
hypothetical proteinSAMN06296052_13627Not AvailableNegative5527161 - 55273376491.84
outer membrane receptor for ferrienterochelin and colicinsSAMN06296052_13628Not AvailableNegative5527639 - 553016792001.8
hypothetical proteinSAMN06296052_13629Not AvailableNegative5530342 - 55304554105.0
histidine kinaseSAMN06296052_13630Not AvailableNegative5530528 - 553204558978.3
hypothetical proteinSAMN06296052_13631Not AvailablePositive5532303 - 55324947253.0

Displaying genes 4791 – 4800 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.