Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium characterized as a heterotroph and requiring aerobic conditions for growth. This species is non-motile and exhibits mesophilic growth characteristics, with an optimal temperature of 29°C. The bacterium has a single replicon, which is indicative of its genetic organization. Its accession number is FZOQ00000000.1, providing a reference for genomic studies and further research into its biological functions. The ecological significance of Pontibacter ummariensis may lie in its role within microbial communities, particularly in environments where organic matter decomposition occurs. As a heterotrophic organism, it likely contributes to nutrient cycling by breaking down organic compounds, thus facilitating the availability of nutrients for other organisms in its ecosystem. Understanding the traits and ecological roles of such microorganisms can provide insights into their contributions to environmental health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis strain NKM1 genome assembly, contig:

Gene Summary

Adenine Count

1476968 bp

Thymine Count

1491156 bp

Guanine Count

1505158 bp

Cytosine Count

1500213 bp

Genome Length

5973733 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein of unknown functionSAMN06296052_12951Not AvailablePositive5182806 - 518326718022.3
gluconate 2-dehydrogenase subunit 3SAMN06296052_12952Not AvailablePositive5183641 - 518414718437.0
choline dehydrogenaseSAMN06296052_12953Not AvailablePositive5184151 - 518586364094.9
hypothetical proteinSAMN06296052_12954Not AvailableNegative5186155 - 51864009322.56
elaa proteinSAMN06296052_12955Not AvailableNegative5186465 - 518691116597.2
major facilitator superfamily proteinSAMN06296052_12956Not AvailableNegative5187071 - 518827944773.9
predicted oxidoreductaseSAMN06296052_12957Not AvailableNegative5188638 - 518960937008.6
hypothetical proteinSAMN06296052_1301Not AvailablePositive5190347 - 51905136720.03
abc-type transport system, involved in lipoprotein release, permease componentSAMN06296052_1302Not AvailableNegative5191143 - 519347085399.5
hypothetical proteinSAMN06296052_1303Not AvailablePositive5193698 - 51938807167.1

Displaying genes 4481 – 4490 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.