Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium characterized as a heterotroph and requiring aerobic conditions for growth. This species is non-motile and exhibits mesophilic growth characteristics, with an optimal temperature of 29°C. The bacterium has a single replicon, which is indicative of its genetic organization. Its accession number is FZOQ00000000.1, providing a reference for genomic studies and further research into its biological functions. The ecological significance of Pontibacter ummariensis may lie in its role within microbial communities, particularly in environments where organic matter decomposition occurs. As a heterotrophic organism, it likely contributes to nutrient cycling by breaking down organic compounds, thus facilitating the availability of nutrients for other organisms in its ecosystem. Understanding the traits and ecological roles of such microorganisms can provide insights into their contributions to environmental health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis strain NKM1 genome assembly, contig:

Gene Summary

Adenine Count

1476968 bp

Thymine Count

1491156 bp

Guanine Count

1505158 bp

Cytosine Count

1500213 bp

Genome Length

5973733 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative abc transport system permease proteinSAMN06296052_12429Not AvailableNegative4766719 - 476914591455.7
dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domainsSAMN06296052_12430Not AvailablePositive4769684 - 477104250181.8
histidine kinase-, dna gyrase b-, and hsp90-like atpaseSAMN06296052_12431Not AvailablePositive4771032 - 477238450997.1
rna polymerase sigma-70 factor, ecf subfamilySAMN06296052_12432Not AvailablePositive4772576 - 477318423309.8
hypothetical proteinSAMN06296052_12433Not AvailablePositive4773162 - 477445446473.4
chrd domain-containing proteinSAMN06296052_12434Not AvailablePositive4774545 - 477500916505.3
planctomycete cytochrome cSAMN06296052_12435Not AvailablePositive4775087 - 477547613458.0
ycei-like domain-containing proteinSAMN06296052_12436Not AvailablePositive4775484 - 477605321208.6
hypothetical proteinSAMN06296052_12437Not AvailablePositive4776059 - 477694333078.6
nucleotide-binding universal stress protein, uspa familySAMN06296052_12438Not AvailablePositive4777220 - 477817335659.6

Displaying genes 4161 – 4170 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.