Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium characterized as a heterotroph and requiring aerobic conditions for growth. This species is non-motile and exhibits mesophilic growth characteristics, with an optimal temperature of 29°C. The bacterium has a single replicon, which is indicative of its genetic organization. Its accession number is FZOQ00000000.1, providing a reference for genomic studies and further research into its biological functions. The ecological significance of Pontibacter ummariensis may lie in its role within microbial communities, particularly in environments where organic matter decomposition occurs. As a heterotrophic organism, it likely contributes to nutrient cycling by breaking down organic compounds, thus facilitating the availability of nutrients for other organisms in its ecosystem. Understanding the traits and ecological roles of such microorganisms can provide insights into their contributions to environmental health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis strain NKM1 genome assembly, contig:

Gene Summary

Adenine Count

1476968 bp

Thymine Count

1491156 bp

Guanine Count

1505158 bp

Cytosine Count

1500213 bp

Genome Length

5973733 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rnd family efflux transporter, mfp subunitSAMN06296052_12139Not AvailablePositive4498013 - 449907737814.0
multidrug efflux pump subunit acrbSAMN06296052_12140Not AvailablePositive4499085 - 4502195115206.0
outer membrane protein tolcSAMN06296052_12141Not AvailablePositive4502213 - 450350547496.0
hypothetical proteinSAMN06296052_12142Not AvailableNegative4503712 - 45039067237.93
transcriptional regulator, tetr familySAMN06296052_12143Not AvailablePositive4504066 - 450465922422.2
serine palmitoyltransferaseSAMN06296052_12144Not AvailablePositive4504908 - 450614944707.6
hypothetical proteinSAMN06296052_12145Not AvailablePositive4506127 - 450724842810.3
nucleoside-diphosphate-sugar epimeraseSAMN06296052_12146Not AvailablePositive4507245 - 450823736379.0
myo-inositol-1-phosphate synthaseSAMN06296052_12147Not AvailablePositive4508273 - 450960149273.3
phosphatidylglycerophosphatase aSAMN06296052_12148Not AvailablePositive4509613 - 451007416610.0

Displaying genes 3911 – 3920 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.