Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-alanine-dl-glutamate epimerase | SAMN06296052_101323 | Not Available | Positive | 369864 - 370880 | 37687.7 |
| 7-keto-8-aminopelargonate synthetase | SAMN06296052_101324 | Not Available | Positive | 370880 - 371965 | 39636.2 |
| uncharacterized membrane protein | SAMN06296052_101325 | Not Available | Positive | 372040 - 373299 | 45103.1 |
| sh3 domain-containing protein | SAMN06296052_101326 | Not Available | Positive | 373359 - 374540 | 43247.1 |
| outer membrane protein tolc | SAMN06296052_101327 | Not Available | Negative | 374917 - 376272 | 50340.1 |
| multidrug efflux pump | SAMN06296052_101328 | Not Available | Negative | 376329 - 379421 | 113418.0 |
| membrane fusion protein, multidrug efflux system | SAMN06296052_101329 | Not Available | Negative | 379542 - 380624 | 39361.4 |
| methylated-dna-protein-cysteine methyltransferase related protein | SAMN06296052_101330 | Not Available | Positive | 380834 - 381175 | 12843.4 |
| protein of unknown function | SAMN06296052_101331 | Not Available | Negative | 381246 - 381824 | 21660.6 |
| histidine kinase | SAMN06296052_101332 | Not Available | Positive | 382133 - 383245 | 42754.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
