Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pdz domain-containing protein | SAMN06296052_11951 | Not Available | Positive | 4300706 - 4302076 | 51579.9 |
| ribosomal protein s18 acetylase rimi | SAMN06296052_11952 | Not Available | Negative | 4302429 - 4302908 | 17631.3 |
| hypothetical protein | SAMN06296052_11953 | Not Available | Negative | 4303024 - 4303374 | 12806.4 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN06296052_11954 | Not Available | Positive | 4303532 - 4303741 | 7651.49 |
| serine/threonine-protein kinase hipa | SAMN06296052_11955 | Not Available | Positive | 4303746 - 4304072 | 12474.9 |
| serine/threonine-protein kinase hipa | SAMN06296052_11956 | Not Available | Positive | 4304224 - 4305105 | 33951.4 |
| hypothetical protein | SAMN06296052_11957 | Not Available | Positive | 4305798 - 4306064 | 9911.26 |
| hypothetical protein | SAMN06296052_11958 | Not Available | Negative | 4306863 - 4307321 | 17178.5 |
| chromosome partitioning protein | SAMN06296052_11959 | Not Available | Negative | 4307420 - 4308178 | 27784.4 |
| initiator replication protein | SAMN06296052_11960 | Not Available | Negative | 4308299 - 4309363 | 40188.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
