Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii restriction/modification system, dna methylase subunit yeea | SAMN06296052_11910 | Not Available | Positive | 4258513 - 4261989 | 130323.0 |
| hypothetical protein | SAMN06296052_11911 | Not Available | Positive | 4261979 - 4262104 | 4529.15 |
| hypothetical protein | SAMN06296052_11912 | Not Available | Positive | 4262101 - 4262214 | 4266.37 |
| abortive infection protein, abia family | SAMN06296052_11913 | Not Available | Positive | 4262266 - 4264158 | 74594.5 |
| hypothetical protein | SAMN06296052_11914 | Not Available | Positive | 4264293 - 4264610 | 12173.5 |
| hypothetical protein | SAMN06296052_11915 | Not Available | Positive | 4264674 - 4266104 | 55169.6 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN06296052_11916 | Not Available | Negative | 4267354 - 4267707 | 12787.5 |
| hypothetical protein | SAMN06296052_11917 | Not Available | Positive | 4267841 - 4268209 | 14397.5 |
| antirestriction protein ardc | SAMN06296052_11918 | Not Available | Positive | 4268292 - 4269236 | 35784.9 |
| hypothetical protein | SAMN06296052_11919 | Not Available | Negative | 4269407 - 4269592 | 6986.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
