Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_11887 | Not Available | Negative | 4246358 - 4246436 | 2946.77 |
| hypothetical protein | SAMN06296052_1191 | Not Available | Positive | 4247255 - 4247896 | 23941.2 |
| histidine kinase | SAMN06296052_1192 | Not Available | Positive | 4248790 - 4249581 | 29444.6 |
| two component transcriptional regulator, luxr family | SAMN06296052_1193 | Not Available | Positive | 4249588 - 4250253 | 25130.4 |
| cell filamentation protein | SAMN06296052_1194 | Not Available | Negative | 4250415 - 4251032 | 23753.5 |
| hypothetical protein | SAMN06296052_1195 | Not Available | Negative | 4251032 - 4251445 | 15951.1 |
| hypothetical protein | SAMN06296052_1196 | Not Available | Positive | 4252888 - 4253847 | 37441.1 |
| jab domain-containing protein | SAMN06296052_1197 | Not Available | Positive | 4253840 - 4255975 | 80706.9 |
| hypothetical protein | SAMN06296052_1198 | Not Available | Positive | 4256005 - 4256811 | 31050.7 |
| atp-dependent dna helicase recg | SAMN06296052_1199 | Not Available | Negative | 4256862 - 4258178 | 49794.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
