Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium characterized as a heterotroph and requiring aerobic conditions for growth. This species is non-motile and exhibits mesophilic growth characteristics, with an optimal temperature of 29°C. The bacterium has a single replicon, which is indicative of its genetic organization. Its accession number is FZOQ00000000.1, providing a reference for genomic studies and further research into its biological functions. The ecological significance of Pontibacter ummariensis may lie in its role within microbial communities, particularly in environments where organic matter decomposition occurs. As a heterotrophic organism, it likely contributes to nutrient cycling by breaking down organic compounds, thus facilitating the availability of nutrients for other organisms in its ecosystem. Understanding the traits and ecological roles of such microorganisms can provide insights into their contributions to environmental health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis strain NKM1 genome assembly, contig:

Gene Summary

Adenine Count

1476968 bp

Thymine Count

1491156 bp

Guanine Count

1505158 bp

Cytosine Count

1500213 bp

Genome Length

5973733 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
multidrug efflux pump subunit acra (membrane-fusion protein)SAMN06296052_11877Not AvailablePositive4231184 - 423250047219.4
membrane fusion protein, cu(i)/ag(i) efflux systemSAMN06296052_11878Not AvailablePositive4232579 - 423379343894.3
protein of unknown functionSAMN06296052_11879Not AvailablePositive4233910 - 423453022144.8
outer membrane receptor proteins, mostly fe transportSAMN06296052_11880Not AvailablePositive4234835 - 423727390672.8
hypothetical proteinSAMN06296052_11881Not AvailableNegative4237458 - 42376918760.02
hypothetical proteinSAMN06296052_11882Not AvailableNegative4238019 - 423915842270.8
type ii restriction/modification system, dna methylase subunit yeeaSAMN06296052_11883Not AvailablePositive4239508 - 4242975129945.0
hypothetical proteinSAMN06296052_11884Not AvailableNegative4243181 - 424371120118.9
polyvinyl alcohol dehydrogenase (cytochrome)SAMN06296052_11885Not AvailablePositive4243971 - 424547654058.3
hypothetical proteinSAMN06296052_11886Not AvailablePositive4246017 - 42462689406.36

Displaying genes 3661 – 3670 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.