Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_11857 | Not Available | Positive | 4199630 - 4200571 | 35179.7 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN06296052_11858 | Not Available | Positive | 4200571 - 4201473 | 31620.7 |
| 3-dehydroquinate synthase | SAMN06296052_11859 | Not Available | Positive | 4201585 - 4202793 | 44530.7 |
| hypothetical protein | SAMN06296052_11860 | Not Available | Positive | 4202859 - 4204142 | 48448.3 |
| predicted pyrophosphatase or phosphodiesterase, alkp superfamily | SAMN06296052_11861 | Not Available | Positive | 4204087 - 4205478 | 52744.5 |
| protein of unknown function | SAMN06296052_11862 | Not Available | Negative | 4205621 - 4206334 | 26291.2 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN06296052_11863 | Not Available | Negative | 4206350 - 4207162 | 30090.7 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN06296052_11864 | Not Available | Negative | 4207204 - 4209540 | 87490.0 |
| beta-glucosidase | SAMN06296052_11865 | Not Available | Negative | 4209885 - 4212242 | 85966.3 |
| lysophospholipase l1 | SAMN06296052_11866 | Not Available | Negative | 4212255 - 4212944 | 26707.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
