Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ahpc/tsa family protein | SAMN06296052_11825 | Not Available | Positive | 4161029 - 4161586 | 20540.0 |
| l,d-transpeptidase catalytic domain | SAMN06296052_11826 | Not Available | Negative | 4161583 - 4162413 | 31225.4 |
| sh3 domain-containing protein | SAMN06296052_11827 | Not Available | Positive | 4162571 - 4163947 | 49858.0 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN06296052_11828 | Not Available | Positive | 4164040 - 4164990 | 36339.9 |
| polyphosphate kinase | SAMN06296052_11829 | Not Available | Negative | 4165105 - 4167207 | 81763.8 |
| glutamate-5-semialdehyde dehydrogenase | SAMN06296052_11830 | Not Available | Negative | 4167514 - 4168761 | 45501.3 |
| dna gyrase subunit b | SAMN06296052_11831 | Not Available | Negative | 4169179 - 4171137 | 72649.2 |
| magnesium transporter | SAMN06296052_11832 | Not Available | Positive | 4171920 - 4172870 | 37041.6 |
| hypothetical protein | SAMN06296052_11833 | Not Available | Negative | 4172975 - 4173613 | 24246.0 |
| uncharacterized conserved protein, duf2267 family | SAMN06296052_11834 | Not Available | Positive | 4174047 - 4174472 | 16474.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
