Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium characterized as a heterotroph and requiring aerobic conditions for growth. This species is non-motile and exhibits mesophilic growth characteristics, with an optimal temperature of 29°C. The bacterium has a single replicon, which is indicative of its genetic organization. Its accession number is FZOQ00000000.1, providing a reference for genomic studies and further research into its biological functions. The ecological significance of Pontibacter ummariensis may lie in its role within microbial communities, particularly in environments where organic matter decomposition occurs. As a heterotrophic organism, it likely contributes to nutrient cycling by breaking down organic compounds, thus facilitating the availability of nutrients for other organisms in its ecosystem. Understanding the traits and ecological roles of such microorganisms can provide insights into their contributions to environmental health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis strain NKM1 genome assembly, contig:

Gene Summary

Adenine Count

1476968 bp

Thymine Count

1491156 bp

Guanine Count

1505158 bp

Cytosine Count

1500213 bp

Genome Length

5973733 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trehalose 6-phosphate synthase/phosphataseSAMN06296052_11815Not AvailableNegative4140076 - 414229885534.5
small-conductance mechanosensitive channelSAMN06296052_11816Not AvailablePositive4142594 - 414368241534.4
uncharacterized protein yebe, upf0316 familySAMN06296052_11817Not AvailablePositive4143729 - 414432822287.8
1,4-alpha-glucan branching enzymeSAMN06296052_11818Not AvailableNegative4144421 - 414679990001.4
maltose alpha-d-glucosyltransferase/ alpha-amylaseSAMN06296052_11819Not AvailableNegative4146792 - 4150121129027.0
alpha-1,4-glucan:maltose-1-phosphate maltosyltransferaseSAMN06296052_11820Not AvailableNegative4150151 - 415217278613.8
maltooligosyl trehalose hydrolaseSAMN06296052_11821Not AvailablePositive4152387 - 415423170070.4
glycosyl hydrolase family 57SAMN06296052_11822Not AvailablePositive4154233 - 415665694005.3
maltooligosyl trehalose synthaseSAMN06296052_11823Not AvailablePositive4156663 - 4159377105032.0
4-alpha-glucanotransferaseSAMN06296052_11824Not AvailablePositive4159379 - 416088758339.8

Displaying genes 3601 – 3610 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.