Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin, 2fe-2s | SAMN06296052_1185 | Not Available | Positive | 4131150 - 4131479 | 12077.5 |
| outer membrane protein beta-barrel domain-containing protein | SAMN06296052_1186 | Not Available | Positive | 4131657 - 4132286 | 22594.3 |
| outer membrane protein beta-barrel domain-containing protein | SAMN06296052_1187 | Not Available | Positive | 4132300 - 4132977 | 25681.1 |
| l-lactate dehydrogenase complex protein llde | SAMN06296052_1188 | Not Available | Negative | 4133032 - 4133697 | 24548.4 |
| hydroxymethylglutaryl-coa lyase | SAMN06296052_1189 | Not Available | Negative | 4133774 - 4134619 | 30987.2 |
| short-chain dehydrogenase | SAMN06296052_11810 | Not Available | Positive | 4134779 - 4135618 | 29817.7 |
| aldehyde dehydrogenase (nad+) | SAMN06296052_11811 | Not Available | Positive | 4135646 - 4137055 | 52784.4 |
| hypothetical protein | SAMN06296052_11812 | Not Available | Positive | 4137206 - 4137601 | 15358.3 |
| exodeoxyribonuclease vii large subunit | SAMN06296052_11813 | Not Available | Positive | 4138028 - 4139590 | 58993.8 |
| exodeoxyribonuclease vii small subunit | SAMN06296052_11814 | Not Available | Positive | 4139604 - 4139852 | 9376.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
