Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spou rrna methylase family protein | SAMN06296052_11794 | Not Available | Negative | 4119515 - 4120039 | 19332.1 |
| dna mismatch repair protein muts | SAMN06296052_11795 | Not Available | Positive | 4120349 - 4122976 | 98239.8 |
| Trna-gly | Not Available | Not Available | Positive | 4123265 - 4123337 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4123417 - 4123504 | Not Available |
| methyltransferase domain-containing protein | SAMN06296052_11798 | Not Available | Positive | 4124467 - 4125615 | 44467.6 |
| transposase and inactivated derivatives | SAMN06296052_11799 | Not Available | Positive | 4126390 - 4127009 | 24315.6 |
| hypothetical protein | SAMN06296052_1181 | Not Available | Negative | 4127251 - 4128093 | 31393.1 |
| hypothetical protein | SAMN06296052_1182 | Not Available | Negative | 4128236 - 4129066 | 31412.0 |
| uncharacterized conserved protein yece, duf72 family | SAMN06296052_1183 | Not Available | Positive | 4129247 - 4130017 | 30398.2 |
| thioredoxin reductase (nadph) | SAMN06296052_1184 | Not Available | Positive | 4130140 - 4131150 | 36720.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
