Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apolipoprotein d and lipocalin family protein | SAMN06296052_11784 | Not Available | Negative | 4106125 - 4106673 | 20631.8 |
| acetyltransferase (gnat) domain-containing protein | SAMN06296052_11785 | Not Available | Negative | 4106689 - 4107120 | 16626.9 |
| hypothetical protein | SAMN06296052_11786 | Not Available | Positive | 4107322 - 4107819 | 18551.6 |
| membrane protein terc, possibly involved in tellurium resistance | SAMN06296052_11787 | Not Available | Positive | 4107966 - 4108742 | 28829.3 |
| peptidase family m28 | SAMN06296052_11788 | Not Available | Positive | 4108900 - 4111218 | 85042.0 |
| protein of unknown function | SAMN06296052_11789 | Not Available | Positive | 4111353 - 4111928 | 21680.9 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN06296052_11790 | Not Available | Negative | 4112055 - 4114091 | 76010.8 |
| hypothetical protein | SAMN06296052_11791 | Not Available | Negative | 4114583 - 4115242 | 25626.1 |
| zn-dependent dipeptidase, dipeptidase homolog | SAMN06296052_11792 | Not Available | Negative | 4115648 - 4116658 | 37536.7 |
| outer membrane receptor proteins, mostly fe transport | SAMN06296052_11793 | Not Available | Negative | 4116789 - 4119239 | 93251.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
