Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl esterase | SAMN06296052_11774 | Not Available | Positive | 4095757 - 4096710 | 34615.4 |
| c-5 sterol desaturase | SAMN06296052_11775 | Not Available | Positive | 4096940 - 4097716 | 30503.3 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN06296052_11776 | Not Available | Positive | 4097907 - 4098893 | 38678.5 |
| conserved hypothetical protein | SAMN06296052_11777 | Not Available | Positive | 4099397 - 4099855 | 16576.6 |
| glutamyl-trna synthetase | SAMN06296052_11778 | Not Available | Negative | 4099925 - 4100878 | 35455.4 |
| small-conductance mechanosensitive channel | SAMN06296052_11779 | Not Available | Negative | 4101000 - 4102424 | 52342.7 |
| protein of unknown function | SAMN06296052_11780 | Not Available | Positive | 4102613 - 4103143 | 19380.0 |
| hypothetical protein | SAMN06296052_11781 | Not Available | Positive | 4103312 - 4104121 | 29100.9 |
| carboxypepd_reg-like domain-containing protein | SAMN06296052_11782 | Not Available | Positive | 4104205 - 4105410 | 45825.2 |
| dienelactone hydrolase family protein | SAMN06296052_11783 | Not Available | Negative | 4105419 - 4106033 | 23387.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
