Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | SAMN06296052_11764 | Not Available | Negative | 4083425 - 4083958 | 20000.2 |
| hypothetical protein | SAMN06296052_11765 | Not Available | Negative | 4084205 - 4084609 | 17035.4 |
| hypothetical protein | SAMN06296052_11766 | Not Available | Negative | 4084827 - 4085660 | 33874.2 |
| response regulator receiver domain-containing protein | SAMN06296052_11767 | Not Available | Negative | 4085829 - 4086236 | 15828.8 |
| pas domain s-box-containing protein | SAMN06296052_11768 | Not Available | Negative | 4086259 - 4088556 | 88187.3 |
| transcription-repair coupling factor | SAMN06296052_11769 | Not Available | Negative | 4089419 - 4092790 | 128607.0 |
| lactoylglutathione lyase | SAMN06296052_11770 | Not Available | Negative | 4093159 - 4093539 | 14412.8 |
| hypothetical protein | SAMN06296052_11771 | Not Available | Positive | 4093639 - 4093743 | 3842.84 |
| predicted o-methyltransferase yrrm | SAMN06296052_11772 | Not Available | Positive | 4093931 - 4094800 | 32814.5 |
| 2-haloacid dehalogenase | SAMN06296052_11773 | Not Available | Negative | 4094831 - 4095523 | 25492.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
