Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase | SAMN06296052_11754 | Not Available | Negative | 4070786 - 4072894 | 81765.5 |
| phosphohistidine phosphatase | SAMN06296052_11755 | Not Available | Negative | 4072974 - 4073468 | 18494.1 |
| gtp-binding protein hflx | SAMN06296052_11756 | Not Available | Negative | 4073660 - 4074847 | 45239.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06296052_11757 | Not Available | Positive | 4075179 - 4076297 | 41700.8 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN06296052_11758 | Not Available | Positive | 4076313 - 4076855 | 20324.2 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN06296052_11759 | Not Available | Negative | 4077145 - 4078431 | 47242.5 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06296052_11760 | Not Available | Positive | 4078594 - 4080813 | 80648.7 |
| hypothetical protein | SAMN06296052_11761 | Not Available | Positive | 4080813 - 4081196 | 14296.5 |
| predicted amidohydrolase | SAMN06296052_11762 | Not Available | Negative | 4081392 - 4082165 | 29390.1 |
| 2-keto-4-methylthiobutyrate aminotransferase apoenzyme | SAMN06296052_11763 | Not Available | Negative | 4082217 - 4083365 | 43137.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
