Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_11714 | Not Available | Negative | 4023604 - 4023855 | 9892.76 |
| transcriptional regulator, contains xre-family hth domain | SAMN06296052_11715 | Not Available | Positive | 4024461 - 4024937 | 18006.2 |
| signal transduction histidine kinase | SAMN06296052_11716 | Not Available | Positive | 4025093 - 4027444 | 89215.9 |
| hypothetical protein | SAMN06296052_11717 | Not Available | Positive | 4027447 - 4028550 | 42827.8 |
| hypothetical protein | SAMN06296052_11718 | Not Available | Positive | 4028570 - 4029349 | 29400.9 |
| n-6 dna methylase | SAMN06296052_11719 | Not Available | Positive | 4029359 - 4031296 | 74197.1 |
| kap family p-loop domain-containing protein | SAMN06296052_11720 | Not Available | Negative | 4031462 - 4034659 | 121335.0 |
| pd-(d/e)xk nuclease superfamily protein | SAMN06296052_11721 | Not Available | Negative | 4034702 - 4035976 | 49051.9 |
| hypothetical protein | SAMN06296052_11722 | Not Available | Positive | 4036593 - 4037177 | 22651.6 |
| helix-turn-helix | SAMN06296052_11723 | Not Available | Positive | 4037180 - 4037737 | 21415.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
