Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | SAMN06296052_11692 | Not Available | Negative | 3996501 - 3997538 | 37590.8 |
| uncharacterized membrane protein | SAMN06296052_11693 | Not Available | Positive | 3997713 - 3998192 | 17389.5 |
| uncharacterized conserved protein, duf2267 family | SAMN06296052_11694 | Not Available | Negative | 3998347 - 3998805 | 17562.0 |
| glucoamylase (glucan-1,4-alpha-glucosidase), gh15 family | SAMN06296052_11695 | Not Available | Negative | 3998933 - 4000771 | 70700.0 |
| hypothetical protein | SAMN06296052_11696 | Not Available | Negative | 4000996 - 4001640 | 24737.1 |
| spw repeat-containing protein | SAMN06296052_11697 | Not Available | Positive | 4001874 - 4003454 | 58679.0 |
| trehalase | SAMN06296052_11698 | Not Available | Positive | 4003426 - 4004769 | 52579.0 |
| rhs repeat-associated core domain-containing protein | SAMN06296052_1171 | Not Available | Positive | 4004978 - 4009917 | 177961.0 |
| hypothetical protein | SAMN06296052_1172 | Not Available | Positive | 4009874 - 4010368 | 18924.4 |
| hypothetical protein | SAMN06296052_1173 | Not Available | Positive | 4010909 - 4011853 | 36011.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
