Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h dehydrogenase (quinone) | SAMN06296052_11672 | Not Available | Positive | 3967289 - 3967906 | 21987.9 |
| nadh dehydrogenase | SAMN06296052_11673 | Not Available | Positive | 3968014 - 3969348 | 50025.2 |
| aldehyde dehydrogenase (nad+) | SAMN06296052_11674 | Not Available | Negative | 3969545 - 3971002 | 52503.8 |
| putative glutamine amidotransferase | SAMN06296052_11675 | Not Available | Negative | 3971225 - 3972184 | 36387.0 |
| nadph:quinone reductase | SAMN06296052_11676 | Not Available | Positive | 3972415 - 3973374 | 34746.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06296052_11677 | Not Available | Positive | 3973393 - 3974166 | 27626.1 |
| aminopeptidase n | SAMN06296052_11678 | Not Available | Negative | 3974282 - 3976939 | 100560.0 |
| inhibitor of kina | SAMN06296052_11679 | Not Available | Positive | 3977141 - 3977854 | 26166.4 |
| antagonist of kipi | SAMN06296052_11680 | Not Available | Positive | 3977851 - 3978858 | 36359.1 |
| upf0271 protein | SAMN06296052_11681 | Not Available | Positive | 3978849 - 3979625 | 27761.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
