Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_11662 | Not Available | Positive | 3952336 - 3953154 | 30452.0 |
| rho termination factor, n-terminal domain | SAMN06296052_11663 | Not Available | Negative | 3953268 - 3953849 | 22330.1 |
| hypothetical protein | SAMN06296052_11664 | Not Available | Negative | 3954217 - 3954684 | 18091.8 |
| n-terminal ig-like domain of cellulase | SAMN06296052_11665 | Not Available | Positive | 3955189 - 3957711 | 94796.9 |
| cation diffusion facilitator family transporter | SAMN06296052_11666 | Not Available | Positive | 3957985 - 3958902 | 32507.0 |
| dna end-binding protein ku | SAMN06296052_11667 | Not Available | Positive | 3959005 - 3959790 | 30172.3 |
| atp-dependent dna ligase ligd phosphoesterase module /atp-dependent dna ligase ligd polymerase module | SAMN06296052_11668 | Not Available | Positive | 3959814 - 3962360 | 95207.1 |
| hypothetical protein | SAMN06296052_11669 | Not Available | Positive | 3962409 - 3964061 | 62470.2 |
| gh3 auxin-responsive promoter | SAMN06296052_11670 | Not Available | Positive | 3964202 - 3965731 | 57922.8 |
| small-conductance mechanosensitive channel | SAMN06296052_11671 | Not Available | Positive | 3965965 - 3967071 | 42216.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
