Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein, luxr family | SAMN06296052_11652 | Not Available | Positive | 3942995 - 3943693 | 26867.3 |
| hypothetical protein | SAMN06296052_11653 | Not Available | Negative | 3943755 - 3943892 | 5275.57 |
| regulatory protein, luxr family | SAMN06296052_11654 | Not Available | Negative | 3943944 - 3944153 | 8110.96 |
| cytochrome c peroxidase | SAMN06296052_11655 | Not Available | Positive | 3944679 - 3945785 | 41328.2 |
| hypothetical protein | SAMN06296052_11656 | Not Available | Positive | 3945791 - 3946528 | 26537.3 |
| cytochrome c peroxidase | SAMN06296052_11657 | Not Available | Positive | 3946539 - 3947615 | 39187.4 |
| hypothetical protein | SAMN06296052_11658 | Not Available | Negative | 3947749 - 3949620 | 67592.7 |
| acyl-coa thioester hydrolase | SAMN06296052_11659 | Not Available | Positive | 3950104 - 3950541 | 16660.1 |
| cytochrome c oxidase assembly protein subunit 15 | SAMN06296052_11660 | Not Available | Negative | 3950538 - 3951611 | 39837.1 |
| cytosine deaminase | SAMN06296052_11661 | Not Available | Positive | 3951791 - 3952228 | 15959.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
