Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06296052_11632 | Not Available | Positive | 3919857 - 3920981 | 41446.8 |
| alpha-glucosidase | SAMN06296052_11633 | Not Available | Positive | 3921125 - 3923593 | 93756.3 |
| polyisoprenoid-binding protein ycei | SAMN06296052_11634 | Not Available | Positive | 3923899 - 3924435 | 19713.9 |
| putative zn-dependent protease | SAMN06296052_11635 | Not Available | Negative | 3924851 - 3926296 | 54399.9 |
| predicted metal-dependent phosphohydrolase, hd superfamily | SAMN06296052_11636 | Not Available | Negative | 3926545 - 3927171 | 24347.8 |
| tonb family c-terminal domain-containing protein | SAMN06296052_11637 | Not Available | Negative | 3927184 - 3928581 | 50019.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06296052_11638 | Not Available | Negative | 3928568 - 3929167 | 23396.2 |
| ca-activated chloride channel family protein | SAMN06296052_11639 | Not Available | Positive | 3929413 - 3931287 | 68191.1 |
| alpha/beta hydrolase family protein | SAMN06296052_11640 | Not Available | Negative | 3931465 - 3932376 | 32732.6 |
| hypothetical protein | SAMN06296052_11641 | Not Available | Positive | 3932902 - 3933324 | 16485.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
